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Statistics in Medicine
Article . 2022 . Peer-reviewed
License: CC BY NC ND
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zbMATH Open
Article . 2022
Data sources: zbMATH Open
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Dynamic downscaling and daily nowcasting from influenza surveillance data

Authors: Rajib Paul; Dan Han; Elise DeDoncker; Diana Prieto;

Dynamic downscaling and daily nowcasting from influenza surveillance data

Abstract

AbstractReal‐time trends from surveillance data are important to assess and develop preparedness for influenza outbreaks. The overwhelming testing demand and limited capacity of testing laboratories for viral positivity render daily confirmed case data inaccurate and delay its availability in preparedness. Using Bayesian dynamic downscaling models, we obtained posterior estimates for daily influenza incidences from weekly estimates of the Centers for Disease Control and Prevention and daily reported constitutional and respiratory complaints during emergency department (ED) visits obtained from the state health departments. Our model provides one‐day and seven‐day lead forecasts along with 95 prediction intervals. Our hybrid Markov Chain Monte Carlo and Kalman filter algorithms facilitate faster computation and enable us to update our estimates as new data become available. Our method is tested and validated using the State of Michigan data over the years 2009‐2013. Reported constitutional and respiratory complaints at the EDs showed strong correlations of 0.81 and 0.68 respectively, with influenza rates. In general, our forecast model can be adapted to track an outbreak with only one respiratory virus as a causative agent.

Keywords

semiparametric modeling, Bayesian methods, temporal analysis, Bayes Theorem, Applications of statistics to biology and medical sciences; meta analysis, Disease Outbreaks, Influenza, Human, Humans, Kalman filter, influenza, Emergency Service, Hospital, Research Articles, Forecasting

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2
Average
Average
Average
Green
hybrid