Rationale High‐precision hydrogen isotope ratio analysis of nitrogen‐bearing organic materials using high‐temperature conversion (HTC) techniques has proven troublesome in the past. Formation of reaction products other than molecular hydrogen (H 2 ) has been suspected as a possible cause of incomplete H 2 yield and hydrogen isotopic fractionation. Methods The classical HTC reactor setup and a modified version including elemental chromium, both operated at temperatures in excess of 1400 °C, have been compared using a selection of nitrogen‐bearing organic compounds, including caffeine. A focus of the experiments was to avoid or suppress hydrogen cyanide (HCN) formation and to reach quantitative H 2 yields. The technique also was optimized to provide acceptable sample throughput. Results The classical HTC reaction of a number of selected compounds exhibited H 2 yields from 60 to 90 %. Yields close to 100 % were measured for the experiments with the chromium‐enhanced reactor. The δ 2 H values also were substantially different between the two types of experiments. For the majority of the compounds studied, a highly significant relationship was observed between the amount of missing H 2 and the number of nitrogen atoms in the molecules, suggesting the pyrolytic formation of HCN as a byproduct. A similar linear relationship was found between the amount of missing H 2 and the observed hydrogen isotopic result, reflecting isotopic fractionation. Conclusions The classical HTC technique to produce H 2 from organic materials using high temperatures in the presence of glassy carbon is not suitable for nitrogen‐bearing compounds. Adding chromium to the reaction zone improves the yield to 100 % in most cases. The initial formation of HCN is accompanied by a strong hydrogen isotope effect, with the observed hydrogen isotope results on H 2 being substantially shifted to more negative δ 2 H values. The reaction can be understood as an initial disproportionation leading to H 2 and HCN with the HCN‐hydrogen systematically enriched in 2 H by more than 50 ‰. In the reaction of HCN with chromium, H 2 and chromium‐containing solid residues are formed quantitatively. Copyright © 2015 John Wiley & Sons, Ltd.