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Transcriptome analysis and anaerobic C4‐dicarboxylate transport in Actinobacillus succinogenes

Authors: Mi Na Rhie; Byeonghyeok Park; Hyeok‐Jin Ko; In‐Geol Choi; Ok Bin Kim;

Transcriptome analysis and anaerobic C4‐dicarboxylate transport in Actinobacillus succinogenes

Abstract

AbstractA global transcriptome analysis of the natural succinate producer Actinobacillus succinogenes revealed that 353 genes were differentially expressed when grown on various carbon and energy sources, which were categorized into six functional groups. We then analyzed the expression pattern of 37 potential C4‐dicarboxylate transporters in detail. A total of six transporters were considered potential fumarate transporters: three transporters, Asuc_1999 (Dcu), Asuc_0304 (DASS), and Asuc_0270‐0273 (TRAP), were constitutively expressed, whereas three others, Asuc_1568 (DASS), Asuc_1482 (DASS), and Asuc_0142 (Dcu), were differentially expressed during growth on fumarate. Transport assays under anaerobic conditions with [14C]fumarate and [14C]succinate were performed to experimentally verify that A. succinogenes possesses multiple C4‐dicarboxlayte transport systems with different substrate affinities. Upon uptake of 5 mmol/L fumarate, the systems had substrate specificity for fumarate, oxaloacetate, and malate, but not for succinate. Uptake was optimal at pH 7, and was dependent on both proton and sodium gradients. Asuc_1999 was suspected to be a major C4‐dicarboxylate transporter because of its noticeably high and constitutive expression. An Asuc_1999 deletion (∆1999) decreased fumarate uptake significantly at approximately 5 mmol/L fumarate, which was complemented by the introduction of Asuc_1999. Asuc_1999 expressed in Escherichia coli catalyzed fumarate uptake at a level of 21.6 μmol·gDW−1·min−1. These results suggest that C4‐dicarboxylate transport in A. succinogenes is mediated by multiple transporters, which transport various types and concentrations of C4‐dicarboxylates.

Related Organizations
Keywords

Dicarboxylic Acid Transporters, Gene Expression Profiling, Gene Expression, Succinates, Actinobacillus, Hydrogen-Ion Concentration, Fumarates, Isotope Labeling, Escherichia coli, Dicarboxylic Acids, Anaerobiosis, Carbon Radioisotopes, Cloning, Molecular, Energy Metabolism, Original Research

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    popularity
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    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
11
Top 10%
Average
Average
Green
gold