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The EMBO Journal
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The EMBO Journal
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Translation elongation can control translation initiation on eukaryotic mRNAs

Authors: Chu, Dominique; Kazana, Eleanna; Bellanger, Noémie; Singh, Tarun; Tuite, Mick F.; von der Haar, Tobias;

Translation elongation can control translation initiation on eukaryotic mRNAs

Abstract

Synonymous codons encode the same amino acid, but differ in other biophysical properties. The evolutionary selection of codons whose properties are optimal for a cell generates the phenomenon of codon bias. Although recent studies have shown strong effects of codon usage changes on protein expression levels and cellular physiology, no translational control mechanism is known that links codon usage to protein expression levels. Here, we demonstrate a novel translational control mechanism that responds to the speed of ribosome movement immediately after the start codon. High initiation rates are only possible if start codons are liberated sufficiently fast, thus accounting for the observation that fast codons are overrepresented in highly expressed proteins. In contrast, slow codons lead to slow liberation of the start codon by initiating ribosomes, thereby interfering with efficient translation initiation. Codon usage thus evolved as a means to optimise translation on individual mRNAs, as well as global optimisation of ribosome availability.

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Keywords

Gene Expression Regulation, Peptide Chain Elongation, Translational, Codon, Initiator, Eukaryota, RNA, Messenger, QP506, Peptide Chain Initiation, Translational, Ribosomes, QR

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
177
Top 1%
Top 10%
Top 1%
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gold