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Bidiagonalization and R-Bidiagonalization: Parallel Tiled Algorithms, Critical Paths and Distributed-Memory Implementation

Authors: Faverge, Mathieu; Langou, Julien; Robert, Yves; Dongarra, Jack;

Bidiagonalization and R-Bidiagonalization: Parallel Tiled Algorithms, Critical Paths and Distributed-Memory Implementation

Abstract

We study tiled algorithms for going from a " full " matrix to a condensed " band bidiagonal " form using orthogonal transformations: (i) the tiled bidiagonalization algorithm BIDIAG, which is a tiled version of the standard scalar bidiagonalization algorithm; and (ii) the R-bidiagonalization algorithm R-BIDIAG, which is a tiled version of the algorithm which consists in first performing the QR factorization of the initial matrix, then performing the band-bidiagonalization of the R-factor. For both BIDIAG and R-BIDIAG, we use four main types of reduction trees, namely FLATTS, FLATTT, GREEDY, and a newly introduced auto-adaptive tree, AUTO. We provide a study of critical path lengths for these tiled algorithms, which shows that (i) R-BIDIAG has a shorter critical path length than BIDIAG for tall and skinny matrices, and (ii) GREEDY based schemes are much better than earlier proposed algorithms with unbounded resources. We provide experiments on a single multicore node, and on a few multicore nodes of a parallel distributed shared-memory system, to show the superiority of the new algorithms on a variety of matrix sizes, matrix shapes and core counts.

Country
France
Keywords

auto-adaptive reduction tree, critical path, greedy algorithms, [INFO.INFO-DC] Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC], bidiagonalization, R-bidiagonalization

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
Green