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Reconstruction of Markov Random Fields from Samples: Some Observations and Algorithms

Reconstruction of Markov random fields from samples: some observations and algorithms
Authors: Guy Bresler; Elchanan Mossel; Allan Sly;

Reconstruction of Markov Random Fields from Samples: Some Observations and Algorithms

Abstract

Summary: Markov random fields are used to model high-dimensional distributions in a number of applied areas. Much recent interest has been devoted to the reconstruction of the dependency structure from independent samples from the Markov random fields. We analyze a simple algorithm for reconstructing the underlying graph defining a Markov random field on \(n\) nodes and maximum degree \(d\) given observations. We show that under mild nondegeneracy conditions it reconstructs the generating graph with high probability using \(\Theta(d \epsilon^{-2}\delta^{-4} \log n)\) samples, where \(\epsilon,\delta\) depend on the local interactions. For most local interactions \(\epsilon,\delta\) are of order \(\exp(-O(d))\). Our results are optimal as a function of \(n\) up to a multiplicative constant depending on \(d\) and the strength of the local interactions. Our results seem to be the first results for general models that guarantee that the generating model is reconstructed. Furthermore, we provide explicit \(O(n^{d+2} \epsilon^{-2}\delta^{-4} \log n)\) running-time bound. In cases where the measure on the graph has correlation decay, the running time is \(O(n^2 \log n)\) for all fixed \(d\). We also discuss the effect of observing noisy samples and show that as long as the noise level is low, our algorithm is effective. On the other hand, we construct an example where large noise implies nonidentifiability even for generic noise and interactions. Finally, we briefly show that in some simple cases, models with hidden nodes can also be recovered.

Country
Australia
Keywords

Local interactions, Multiplicative constants, Probability in computer science (algorithm analysis, random structures, phase transitions, etc.), Underlying graphs, correlation decay, Markov processes, reconstruction from samples, Random fields; image analysis, Independent samples, Correlation decay, SIMPLE algorithm, Keywords: Dependency structures, Generating models, Markov random fields, Graph algorithms (graph-theoretic aspects), Markov Random Fields, Random fields, Image segmentation Algorithms, Nonnumerical algorithms, Algorithms

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    71
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    Top 10%
    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
71
Top 10%
Top 10%
Average
Green
bronze