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poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 09 Jun 2020Publisher:Zenodo

Authors: Brandt, Christian; Krautwurst, Sebastian; Riccardo, Spott; Lohde, Mara; Jundzill, Mateusz; Marquet, Mike; Hölzer, Martin;

doi: 10.5281/zenodo.6801763 , 10.5281/zenodo.7018521 , 10.5281/zenodo.16742733 , 10.5281/zenodo.12804756 , 10.5281/zenodo.16603664 , 10.5281/zenodo.7643308 , 10.5281/zenodo.5764611 , 10.5281/zenodo.6351410 , 10.5281/zenodo.10715935 , 10.5281/zenodo.5775550 , 10.5281/zenodo.10102949 , 10.5281/zenodo.8210568 , 10.5281/zenodo.7669519 , 10.5281/zenodo.6669990 , 10.5281/zenodo.13839131 , 10.5281/zenodo.16736799 , 10.5281/zenodo.16562619 , 10.5281/zenodo.5950143 , 10.5281/zenodo.5717378 , 10.5281/zenodo.5482649 , 10.5281/zenodo.6458283 , 10.5281/zenodo.5972512 , 10.5281/zenodo.6461218 , 10.5281/zenodo.14860243 , 10.5281/zenodo.5554544 , 10.5281/zenodo.7225517 , 10.5281/zenodo.7638656 , 10.5281/zenodo.5792243 , 10.5281/zenodo.5554132 , 10.5281/zenodo.5789800 , 10.5281/zenodo.6406590 , 10.5281/zenodo.5767206 , 10.5281/zenodo.6043105 , 10.5281/zenodo.5911109 , 10.5281/zenodo.7928505 , 10.5281/zenodo.16570816 , 10.5281/zenodo.4153509 , 10.5281/zenodo.5877412 , 10.5281/zenodo.6592266 , 10.5281/zenodo.8343862 , 10.5281/zenodo.13734091

poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing

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Abstract

bumping pangolin min container changed code to support nextclade 2 now and included the CLI changes Full Changelog: https://github.com/replikation/poreCov/compare/1.6.1...1.7.0

If you use this software, please cite it as below.

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	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
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	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average

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