github.com/broadinstitute/viral-pipelines/augur_from_mltree
10.5281/zenodo.19393529 , 10.5281/zenodo.18473361 , 10.5281/zenodo.18506631 , 10.5281/zenodo.15428517 , 10.5281/zenodo.18869943 , 10.5281/zenodo.15177572 , 10.5281/zenodo.18054043 , 10.5281/zenodo.18674058 , 10.5281/zenodo.18634689 , 10.5281/zenodo.15177571 , 10.5281/zenodo.18236325 , 10.5281/zenodo.18774914
10.5281/zenodo.19393529 , 10.5281/zenodo.18473361 , 10.5281/zenodo.18506631 , 10.5281/zenodo.15428517 , 10.5281/zenodo.18869943 , 10.5281/zenodo.15177572 , 10.5281/zenodo.18054043 , 10.5281/zenodo.18674058 , 10.5281/zenodo.18634689 , 10.5281/zenodo.15177571 , 10.5281/zenodo.18236325 , 10.5281/zenodo.18774914
github.com/broadinstitute/viral-pipelines/augur_from_mltree
Take a premade maximum likelihood tree (Newick format) and run the remainder of the augur pipeline (timetree modificaitons, ancestral inference, etc) and convert to json representation suitable for Nextstrain visualization. See https://nextstrain.org/docs/getting-started/ and https://nextstrain-augur.readthedocs.io/en/stable/
selected citations These citations are derived from selected sources.This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).0 popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.Average influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).Average impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.Average
Citations provided by BIP!Popularity provided by BIP!