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Libra v5.7.0

Authors: Akimov, Alexey; Shakiba, Mohammad; Smith, Brendan; Dutra, Matthew; Han, Daeho; Sato, Kosuke; Temen, Story; +5 Authors
Abstract

The major additions the new FSSH-3 methodology is implemented the FSSH-2 of Araujo et al. is implemented (with slight changes compared to the published version, but likely this is what was intended) added Jasper-Truhlar criterion of velocity reversal on frustrated hops added MD trajectory alignment function/script which processes the MD trajectory to remove the center of mass translation and the overall rotation of the molecule as whole (this is a Python re-interpretation of the Fortran code found in the auxiliary tools of NWChem) added a number of published spin-boson (and their many-state generalization) models withing the GLVC (generalized linear vibronic coupling models) implemented the Ohmic and Drude-Lorentz baths discretizations implemented a correct way of computing SH-based diabatic populations of states revised the way to initialize adiabatic states when the initial conditions are chosen in the diabatic representation added a number of matrix decompositions and linear equations solvers (based on matrix decompositions) from Eigen 3 code fixed bugs in sum_col and sum_row functions of generic matrix class significantly accelerated calculations of the matrix of the SD overlaps but using numpy methods in step3 module of the NBRA workflow (see below) implemented a lot of the functions and workflow for the ML-based prediction of KS Hamiltonians (see below) ongoing work on clarifying the MFSD (see below) Auto-generated updates Update MFSD by @DaehoHan in #207 Use act_states for saving the reference state of MFSD by @DaehoHan in #208 Kohn-Sham Hamiltonian mapping with machine-learning first version by @MohammadShakiba in #209 Revision of step3 and high-throughput implementation of KS ML map approach by @MohammadShakiba in #210 Full Changelog: v5.6.0...v5.7.0

Keywords

trajectory surface hopping, charge transfer, quantum dynamics, nonadiabatic molecular dynamics, computational materials research, solid state, nonadiabatic dynamics, molecular simulations, computational chemistry, molecular dynamics, excited states

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average