Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2017
License: CC BY SA
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2017
License: CC BY SA
Data sources: ZENODO
addClaim

Data for group analyses in the Frontiers Reseach Topic: From raw MEG/EEG to publication: how to perform MEG/EEG group analysis with free academic software.

Authors: Lau Møller Andersen;

Data for group analyses in the Frontiers Reseach Topic: From raw MEG/EEG to publication: how to perform MEG/EEG group analysis with free academic software.

Abstract

!!IMPORTANT!! Please be aware that the MRI segmetations for subjects, 1, 18 and 20 are not correct. Therefore, files for these subjects should be retrieved from version 2. All files for the remaining subjects can be retrieved here. Scripts should be retrieved from: https://github.com/ualsbombe/omission_frontiers.git !!IMPORTANT!! !!Please go to http://natmeg.se/teamNatMEG/lau%20andersen.html to get the preprinted manuscripts associated with the data!! Dataset with tactile expectations, meant to be analysed with pipelines for either MNE-python or FieldTrip, aiming to follow the MEG-BIDS structure Please refer to (hopefully) upcoming manuscripts in Frontiers for the research topic called From raw MEG/EEG to publication: how to perform MEG/EEG group analysis with free academic software. The articles will be authored by Lau M. Andersen. Manuscripts showcasing the pipeline may also be requested by emailing me at lau.moller.andersen@ki.se or ualsbombe@gmail.com ################## ## The MEG data ## ################## Raw fif files are contained in the data folder, ordered by subject (n=20) There is one recording for each subject, MaxFiltered, called oddball_absence-tsss-mc_meg.fif. These are split into three files with -1 and -2 being the remainder of the recording ######################## ## Processed MRI data ## ######################## For the MRI, only the segmented data are provided. This is to sufficient to make the volume conduction model and the source model, while protecting the subjects' identity For Fieldtrip, there is an mri_segmented.mat for each subject, which is found in the meg (sic!) folder for each subject. This has been co-registered to the MEG data For MNE-Python, the FreeSurfer directory should also be used, which contains a folder for each subject that contains surfaces (surf) and boundary element methods models (bem) that are used for source reconstruction in MNE-python. There is also a trans-file for each subject (oddball_absence_dense-trans.fif) specifying the co-registration between MEG and MRI coordinate systems for the MNE-Python analysis ###################### ## Metadata ########## ###################### Each subject has a number of tsv-files: *channel.tsv contain information about the channels in that recording *events.tsv contain information about the events in that recording removed_trial_indices.tsv contains information about which events were removed manually (NB! this is only used for the FieldTrip analysis) ica_components.tsv contains information which independent component were removed manually (NB! this is only used for the FieldTrip analysis) *scans_tsv contain information about the scans conducted ################### ## Scripts ######## ################### In the scripts folder there are three folders: "matlab", "python" and "bash". They each contain scripts of that type. The matlab scripts are for the FieldTrip analysis The python and bash scripts are for the MNE-Python analysis

Related Organizations
Keywords

MEG, analysis pipeline, MNE-Python, minimum norm estimate (MNE), Tactile Expectations, Group analysis, good practice, fieldtrip, beamformer

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 130
    download downloads 36
  • 130
    views
    36
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
130
36
Related to Research communities