Ancient diversity in host-parasite interaction genes in a model parasitic nematode

Files associated with the "Ancient diversity in host-parasite interaction genes in a model parasitic nematode" manuscript. VCF files: HB1_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz HB2_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz HB3_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz HP1_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz HP2_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz H. mixtum genome assemblies: Hm16_merged_spades_scaffolds.fa.gz Hm2_merged_spades_scaffolds.fa.gz Strongylomorph phylogeny: Strongylomorph_phylogeny_18Jan2023_20spp_511orthos.astral.nwk.gz Gene annotation files: ngHelPoly1.1.primary.final_annotations.cds.fa.gz ngHelPoly1.1.primary.final_annotations.gff3.gz ngHelPoly1.1.primary.final_annotations.proteins.fa.gz nxHelBake1.1.primary.final_annotations.cds.fa.gz nxHelBake1.1.primary.final_annotations.gff3.gz nxHelBake1.1.primary.final_annotations.proteins.fa.gz Curated repeat libraries: ngHelPoly1.1.repeats.01062023.fa.gz nxHelBake1.1.repeats.01062023.fa.gz Assembled transcripts: ngHelPoly1_hq_transcripts.fa.gz nxHelBake1_hq_transcripts.fa.gz

Related Organizations

Wellcome Sanger Institute
United Kingdom

Keywords

Parasite genomics, Divergent haplotypes

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