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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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Monte Carlo Arithmetic Instrumented DeepGOPlus Protein Function Predictions

Authors: Gonzalez Pepe, Inés; Chatelain, Yohan; Kiar, Gregory; Glatard, Tristan;

Monte Carlo Arithmetic Instrumented DeepGOPlus Protein Function Predictions

Abstract

This dataset contains the perturbed protein function predictions by the DeepGOPlus model excluding the Diamond tool component. The model was perturbed with Verrou, an implementation of Monte Carlo Arithmetic (MCA), a stochastic arithmetic technique that injects noise into a program that simulates changes in a user's execution environment. The folders contain pkl files that can be read with the Pandas python library to load up dataframes containing the predictions and original values. Each file is one MCA sample run across the entire DeepGOPlus test set. The folder "Verrou_All" contains predictions where the entirety of the model was instrumented with MCA. The folder "Verrou_TF" contains predictions where only the Tensorflow library was instrumented with MCA. The folder "Fuzzy_Python" contains predictions where only the Python interpreter was instrumented with MCA. The folder "VPREC_Outbound_Mode" contains predictions where the virtual precision of the floating point operations was reduced witht the VPREC precision simulator tool in outbound mode. The folder "VPREC_Inbound_Mode" contains predictions where the virtual precision of the floating point operations was reduced witht the VPREC precision simulator tool in inbound mode. More information can be found by consulting this paper or this Github repository.

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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