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Dataset . 2023
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Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
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Repeat catalogs for TRGT

Research datakeyboard_double_arrow_right Dataset 30 May 2023Publisher:Zenodo
Authors: Dolzhenko, Egor; English, Adam;

doi: 10.5281/zenodo.7987364 , 10.5281/zenodo.7987365 , 10.5281/zenodo.8329210

Repeat catalogs for TRGT

Abstract

This dataset contains various repeat catalogs for the Tandem Repeat Genotyping Tool (TRGT): pathogenic_repeats.hg38.bed contains annotations of 56 known pathogenic repeats. polymorphic_repeats.hg38.bed contains 171,146 polymorphic repeats. The original version of this catalog was made for short reads and is distributed under CC BY-SA 4.0 license. adotto_repeats.hg38.bed contains 937,122 repeats originally released by the Genome in a Bottle tandem repeat benchmarking project 10.5281/zenodo.7226352. adotto_hprc.tdb.tar is a TRGTdb file containing alleles of repeats from the adotto_repeats.hg38.bed catalog across 100 HPRC samples. Please consider citing TRGT preprint if you are using these data.

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Tandem repeats

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download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
3
Top 10%
Average
Average
180
62