Lonewolfenrir/Funsec Funsec-V3

This script was designed to automate the prediction of fungi secreted proteins from a single or a batch of FASTA files using a complex pipeline that uses programs for the prediction of signal peptides, trans-membrane regions, subcellular localization and endoplasmic reticulum targeting motif. It can also be used for the prediction of complete fungi secretomes when given their proteomes.

Thanks are due, for the financial support to CESAM (UID/AMB/50017-POCI- 01-0145-FEDER-007638) and to the research project ALIEN (PTDC/AGR- PRO/2183/2014-POCI-01-0145-FEDER-016788), to FCT/MEC through national funds, within the PT2020 Partnership Agreement and Compete 2020. The authors acknowledge FCT financial support to A Alves (IF/00835/2013) and AC Esteves (BPD/102572/2014).

Related Organizations

University of Lisbon
Portugal
University of Aveiro
Portugal
Centro de Estudos Ambientais e Marinhos
Portugal

Keywords

Fungi, Secretome

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