Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
versions View all 2 versions
addClaim

Supplementary Material: Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field

Authors: Petra Hribovsek; Emily Olesin Denny; Håkon Dahle; Achim Mall; Thomas Øfstegaard Viflot; Chanakan Boonnawa; Eoghan P. Reeves; +2 Authors

Supplementary Material: Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field

Abstract

This repository contains four Supplementary Material files related to the manuscript "Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field". 1) SupplementaryMaterial1_TableS1.pdf Supplementary Material 1. Sampling locations. 2) SupplementaryMaterial2.pdf Supplementary Material 2. Supplementary Data and Figures. 3) SupplementaryMaterial3.xlsx Supplementary Material 3. Supplementary Tables. Supplementary Table S1. Viral populations in Fåvne black smoker iron microbial mat. Supplementary Table S2. MAGs present in the black smoker iron microbial mat. Supplementary Table S3. Coverage of Zetaproteobacteria MAGs in Fåvne samples. Supplementary Table S4. Zetaproteobacteria MAGs used in this study. Supplementary Table S5. Predicted gene expression based on codon usage. Supplementary Table S6. Hydrogenase Hya included in the hya phylogenetic tree. Supplementary Table S7. Cyc2 included in the cyc2 phylogenetic tree. Supplementary Table S8. Results of proteomics analysis. Supplementary Table S9. Heavy metal resistance genes identified using BacMet database. Supplementary Table S10. Sequencing statistics for MinION Nanopore sequencing. Supplementary Table S11. Sequencing statistics for Illumina NovaSeq sequencing. Supplementary Table S12. Assembly statistics for comparison, based on MetaQUAST. Supplementary Table S13. List of single-copy marker genes used for concatenated phylogeny. Supplementary Table S14. Selected genes for metabolism annotation. 4) SupplementaryMaterial4.mp4 Supplementary Material 4. Sampling video of black smoker iron microbial mats at Fåvne hydrothermal vent (North Tower vent site).

Related Organizations
Keywords

Zetaproteobacteria, hydrothermal vents, iron oxidation, hydrogen oxidation, microbial mats, genome-resolved metagenomics

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 21
    download downloads 6
  • 21
    views
    6
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
21
6