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License: CC BY
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ZENODO
Dataset . 2023
License: CC BY
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
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Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
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Reference Data for EMASE and GBRS

Research datakeyboard_double_arrow_right Dataset 26 Aug 2023Publisher:Zenodo
Authors: Lloyd, Michael;

doi: 10.5281/zenodo.8186980 , 10.5281/zenodo.15091310 , 10.5281/zenodo.8289936 , 10.5281/zenodo.8186981

Reference Data for EMASE and GBRS

Abstract

The files in this repository support the analysis of genetically diverse samples (e.g., DO and CC mice) with Expectation-Maximization algorithm for Allele Specific Expression: EMASE, and Genome reconstruction By RNA-Sequencing GBRS, and the generation of reference files required for running these tools. These files are used in the The Jackson Laboratory Computational Sciences Nextflow pipelines. Pipeline specific documentation is in the repository wiki for running EMASE and/or GBRS.

Related Organizations
Keywords

GRCm39, rel_2112_v8

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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