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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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Development of a pipeline for analyzing the gene expression profile of transcripts

Authors: De Pietro Bigi, Julia;

Development of a pipeline for analyzing the gene expression profile of transcripts

Abstract

Data corresponding to the scientific initiation project in bioinformatics. The data in the parcial_report_input folder are equivalent to raw counts, metadata and data of FPKM values of genes from the analysis performed during the first six months of the project. They correspond the counts and metadata from a previous study from renal cell carcinoma. As for the Final_report_input, it also contains counts and metadata, but from a previous study of ostesarcoma. The metadata and raw data files can be found under the accesion number hs000699.v1.p1 in dbGAP. The scripts wrote to perform pre-processing of samples, differential expression analysis, network analysis and functional annotation can be found in GitHub repository.

Keywords

bioinformatics, transcripts, RNA-seq

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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