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Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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HmmUFOtu DB (ggRDP18 full length)

Research datakeyboard_double_arrow_right Dataset 02 Aug 2023Publisher:Zenodo
Authors: Kim, Sangsoo;

doi: 10.5281/zenodo.8207514 , 10.5281/zenodo.8207513

HmmUFOtu DB (ggRDP18 full length)

Abstract

A reference database for HmmUFOtu by Sangsoo Kim. The original database pre-built with GreenGene Database was augmented with RDP 18 trainingset sequences. The sequences in this database are of full length 16S rRNA. For V3-V4 regions only, there is another Zenodo entry. For details, see our github. The main file, "ggRDP18_GTR.ptu" is 26GB big, and its upload failed with "Bad gateway". As an alternative, "hmmufotu-build.bash" script is uploaded. It can be used to build the database using the files in this fold.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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