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The data was simulated in GATEv8.0. The macro's and other files for the simulation can be found in the folders: Sim_50_40, Sim80_60 and Sim90_70. Here, the different files to perform the simulation are given, as well as the output data, found in the folders Flats and Projs (flatfields and projections) in the form of a csv-file. The csv-file contains 5000 rows (one for each image), and each row contains a flattened 450x450 image. The files for visualization of the fiber directions are given in the folder MRtrix. This folder contains the reconstructed scatter magnitudes and their respective directions in a mat-file. On this set of directions the constrained spherical deconvolution is applied using the sf_dirs.mif, sf_mask.mif, sf_response.mif and data.mif files. This returns the orientation density function in each voxel as output (odf_csd_14.mif). An alternative approach is performing a Funk-Radon transform on the coefficients of the scatter function (data_coeffs_10.mif) to obtain odf_frt_10.mif. Using a peak finding algorithm the fiber orientations are extracted from these odf-files and written to peaks_x.mif files, with or without a threshold (10% of largest amplitude).
This research was funded by research Foundation - Flanders (FWO) with grant numbers G090020N, G094320N and 1S46122N. This dataset is supplementary to an article in Polymers 2023, 15(13), 2887; https://doi.org/10.3390/polym15132887
X-ray computed tomography, constrained spherical deconvolution, edge illumination, fiber-reinforced polymers, phase contrast imaging
X-ray computed tomography, constrained spherical deconvolution, edge illumination, fiber-reinforced polymers, phase contrast imaging
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