Model weights for the white adipose tissue atlas (WATLAS)

Model weights to use contextualization of new sxRNA-seq from human adipose tissue using transfer learning. For a guide on how to use these weights, please look at the section ''Perform surgery on reference model and train on query dataset without cell type labels" under scANVI in the scArches documentation: https://docs.scarches.org/en/latest/scanvi_surgery_pipeline.html

Related Organizations

University of Southern Denmark
Denmark

Keywords

WATLAS, Adipose tissue, Single-cell RNA-seq, scANVI, Transfer learning

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Related to Research communities

UArctic