Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
versions View all 4 versions
addClaim

This Research product is the result of merged Research products in OpenAIRE.

You have already added 0 works in your ORCID record related to the merged Research product.

Simulated brainweb PET/MR data sets for denoising and deblurring

Authors: Schramm, Georg;

Simulated brainweb PET/MR data sets for denoising and deblurring

Abstract

The data set consists of 20 subjects based on the normal anatomical models from the brainweb phantom. https://brainweb.bic.mni.mcgill.ca/ For each subject the data is organized as follows: subjectXX mu.nii.gz -> (attenuation image) t1.nii.gz -> (high resolution and low noise T1 MR) sim_0 -> first simulated PET acquisition true_pet.nii.gz -> true tracer uptated osem_psf_counts_0.0E+00.nii.gz -> OSEM recon of simulated noise free data osem_psf_counts_1.0E+07.nii.gz -> OSEM recon of simulated noisy data (1e7 counts) -> high noise level osem_psf_counts_5.0E+08.nii.gz -> OSEM recon of simulated noisy data (5e8 counts) -> low noise level sim_1 -> second simulated PET acquisition osem_psf_counts_0.0E+00.nii.gz osem_psf_counts_1.0E+07.nii.gz osem_psf_counts_5.0E+08.nii.gz true_pet.nii.gz sim_2 -> third simulated PET acquisition osem_psf_counts_0.0E+00.nii.gz osem_psf_counts_1.0E+07.nii.gz osem_psf_counts_5.0E+08.nii.gz true_pet.nii.gz All data sets have a shape of (256,256,258) and a voxel size of 1mm x 1mm x 1mm and are provided in nifti format. All PET acquisitions have different contrasts. PET data was simulated with a projector that approximates the geometry and resolution of the Siemens Biograph mMR. The T1 MR scans and antomical models used to create the ground truth PET images are taken from the BrainWeb: Simulated Brain Database. See: http://www.bic.mni.mcgill.ca/brainweb/ C.A. Cocosco, V. Kollokian, R.K.-S. Kwan, A.C. Evans : "BrainWeb: Online Interface to a 3D MRI Simulated Brain Database" NeuroImage, vol.5, no.4, part 2/4, S425, 1997 -- Proceedings of 3-rd International Conference on Functional Mapping of the Human Brain, Copenhagen, May 1997. R.K.-S. Kwan, A.C. Evans, G.B. Pike : "MRI simulation-based evaluation of image-processing and classification methods" IEEE Transactions on Medical Imaging. 18(11):1085-97, Nov 1999. R.K.-S. Kwan, A.C. Evans, G.B. Pike : "An Extensible MRI Simulator for Post-Processing Evaluation" Visualization in Biomedical Computing (VBC'96). Lecture Notes in Computer Science, vol. 1131. Springer-Verlag, 1996. 135-140. D.L. Collins, A.P. Zijdenbos, V. Kollokian, J.G. Sled, N.J. Kabani, C.J. Holmes, A.C. Evans : "Design and Construction of a Realistic Digital Brain Phantom" IEEE Transactions on Medical Imaging, vol.17, No.3, p.463--468, June 1998

Related Organizations
Keywords

PET, PET/MR, denoising, deblurring, brainweb

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 82
    download downloads 63
  • 82
    views
    63
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
82
63