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Other literature type . 2021
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Conference object . 2021
License: CC BY
Data sources: Datacite
ZENODO
Conference object . 2021
License: CC BY
Data sources: Datacite
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Core resources for genome analysis

Authors: Muffato, Matthieu; Blaxter, Mark;

Core resources for genome analysis

Abstract

The Wellcome Sanger Institute will sequence and assemble tens of thousands of genomes across the next decade through large-scale biodiversity sequencing projects such as Darwin Tree of Life. The projects span the entire tree of eukaryotic life, and the genomes will enable new and unprecedented science. But assembling a genome is just the first step on this journey. Most studies analyse features annotated on the genomes, rather than the raw DNA sequences themselves. To facilitate this, we will compute a set of elementary sequence analyses on every genome that comes out of the institute and provide the tracks on a publicly available server through Track Hubs. Envisaged tracks include sequence composition analysis (and by extension k-mer frequency analysis for several k), repeat, gene, and variants distributions. The goal is to save the community efforts and resources by providing a uniform dataset, whilst reducing the overall carbon footprint of genome analysis.

Keywords

genomics, bioinformatics, resource, genomes, pipelines

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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Italian National Biodiversity Future Center