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lskatz/lyve-SET: v1.1.4g

Authors: Katz, Lee; Andrewdhuang; Teishi;

lskatz/lyve-SET: v1.1.4g

Abstract

An accumulation of random fixes has led to v1.1.4g. However the biggest factor in making a new release was the NCBI change from http to https, making the lambda dataset difficult to acquire without an updated release. edirect https fix embedded in make install 8798380 xargs fix in a couple of scripts, replacing {} with $0 b90eae9 C. bot presets now available set_diagnose checks for insert length sizes 6604151 Array::IntSpan now installed with make install because it is a faster range class 82279e2 Better version of makeRegions.pl, the script that will describe genomic regions, given a fasta, vcf, or bam file 09fb001 Better version of the findPhages module 592c144 Plugin for compatibility with Tinsel (for any plugin, you can run the plugin executable with the Lyve-SET project as a parameter) 47ee8cc Check for path to Java and to Grep, just in case those are not in the path e0d1573

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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