Downloads provided by UsageCounts
All data supporting the publication: "Multiplexed imaging mass cytometry analysis characterizes the vascular niche in pancreatic cancer." 1. Fully_Processed_OME.TIFF: This folder contains the OME.TIFF files with all markers after compensation and hot pixel removal for visualization of the data. These can be opened with QuPath and other software. 2. PDAC_IMC_Seurat_FINAL.rds: Seurat object of all cells included in the analysis with cell type and neighborhood annotations, and unintegrated and rPCA-integrated UMAP reductions. 3. Raw_Data_TIFF_Files: All raw individual TIFF files from the image acquisition 4. ROI_Selection: Brightfield and IHC images of individual samples showing where the ROIs for each sample are collected 5. Segmentation_Files: All relevant segmentation files from Mesmer for nuclear and whole cell segmentation.
Pancreatic ductal adenocarcinoma, Imaging mass cytometry, Multiplexed imaging, Spatial proteomics, Angiogenesis
Pancreatic ductal adenocarcinoma, Imaging mass cytometry, Multiplexed imaging, Spatial proteomics, Angiogenesis
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |
| views | 21 | |
| downloads | 6 |

Views provided by UsageCounts
Downloads provided by UsageCounts