This repository holds the trained DNA accessibility and enhancer activity models, and the data used to train and evaluate the model. Files for DNA accessibility models: Accessibility_models_training_data.tar.gz <fold>_sequences_<set>.fa FASTA files with DNA sequences of genomic regions from train/val/test sets. <fold>_sequences_activity_<set>.txt Files with accessibility scores for sequences from train/val/test sets. Accessibility_model_files.tar.gz model.h5 and model.json files for each Results_<fold>_<tissue>_DeepSTARR2_<rep> Accessibility_models_test_set_predictions.rds RDS object with predictions for accessibility Files for enhancer activity models: EnhancerActivity_model_files.tar.gz <fold>_sequences_<set>.fa FASTA files with DNA sequences of genomic regions from train/val/test sets. <fold>_sequences_activity_<set>.txt Files with enhancer activity labels for sequences from train/val/test sets. EnhancerActivity_model_files.tar.gz model.h5, model.json and Model_evaluation.pdf files for each Results_<fold>_<tissue>_<rep> EnhancerActivity_models_clean_evaluation_data.rds RDS object with sequences used for final evaluation of the models EnhancerActivity_models_results_per_tissue_test_set.rds RDS object with predictions and results of the enhancer activity models