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Dataset . 2023
License: CC BY
Data sources: Datacite
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figshare
Collection . 2024
License: CC BY
Data sources: Datacite
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Collection . 2024
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
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CNETML: maximum likelihood inference of phylogeny from copy number profiles of multiple samples

Research datakeyboard_double_arrow_right Dataset , Collection 16 May 2023Publisher:Zenodo
Authors: Lu, Bingxin; Curtius, Kit; Graham, Trevor A.; Yang, Ziheng; Barnes, Chris;

doi: 10.5281/zenodo.7313229 , 10.6084/m9.figshare.c.6705533.v1 , 10.6084/m9.figshare.c.6705533 , 10.5281/zenodo.7940187

CNETML: maximum likelihood inference of phylogeny from copy number profiles of multiple samples

Abstract

This folder includes simulated and real data used in validating CNETML, a new maximum likelihood method designed to reconstruct the evolutionary history of multiple samples of a single patient which may be taken at different locations and/or times, which can take as input (relative) total integer copy numbers called from shallow whole genome sequencing data.

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Keywords

phylogeny inference, copy number alteration, model of evolution, low-coverage sequencing, maximum likelihood

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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