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ZENODO
Dataset . 2023
License: CC 0
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC 0
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC 0
Data sources: ZENODO
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EAGS: efficient and adaptive gaussian smoothing applied to high-resolved spatial transcriptomics

Authors: Tongxuan Lv; Ying Zhang; Mei Li; Qiang Kang; Shuangsang Fang; Yong Zhang; Susanne Brix; +1 Authors

EAGS: efficient and adaptive gaussian smoothing applied to high-resolved spatial transcriptomics

Abstract

This dataset is used to preserve the mouse brain and mouse olfactory bulb data (in h5ad format) involved in the EAGS study. You can get details of the different datasets from readme.txt. Abstract of the EAGS study: The emergence of high-resolved spatial transcriptomics (ST) technology has facilitated the research of novel methods to investigate biological development, growth and other complex biological processes. High-resolution and whole transcriptomics ST datasets require customized imputation methods to improve signal-to-noise ratio and the data quality. We propose an efficient and adaptive gaussian smoothing (EAGS) method for imputation on high-resolved ST. Its adaptive two-factor smoothing creates patterns based on the spatial and expression information of the cells, creates adaptive weights for the smoothing of cells in the same pattern, then utilizes the weights to restore the gene expression profiles. The performance and efficiency of EAGS are verified on high-resolved ST data of mouse brain and olfactory bulb. Compared with other competitive methods, EAGS shows higher clustering accuracy, better biological interpretation and a significant advantage in computational consumption.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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