Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
versions View all 3 versions
addClaim

WilkinsonAFIRdb and related

Authors: Staub, Ruben;

WilkinsonAFIRdb and related

Abstract

Databases for all data related to the article: "Challenges for Kinetics Predictions via Neural Network Potentials: a Wilkinson’s catalyst case" Each dataset was created with ASE db, and can be explored with: import ase.db with ase.db.connect(db_path) as db: for row in db.select(): atoms = row.toatoms() # ASE Atoms object data = row.data # Diverse information (energy, gradients and dipole, at DFT, xTB [and NNP or NNP(+xTB)], geometry type, reaction path network connection, ...) Data labels: data['energy']: DFT energy [eV] data['gradients']: DFT gradients [eV/A] data['dipole']: DFT dipole [Debye] data['xTB']['GFN2-xTB']['energy']: xTB energy [eV] (when available) data['xTB']['GFN2-xTB']['gradients']: xTB gradients [eV/A] (when available) data['xTB']['GFN2-xTB']['dipole']: xTB dipole [Debye] (when available) data['E_pred']: Prediction energy [eV] (NNP, NNP(+xTB), xTB, depending on the dataset), if available data['grad_pred']: Prediction gradients [eV/A] data['dipole_pred']: Prediction gradients [Debye] data['geo_type']: Type of geometry ('EQ': Equilibrium state, 'TS': Transition state, 'NODE': intermediary geometry, 'TSEQ': barrier-less TS [both path top and path endpoint]) data['EQ_id']: GRRM EQ number (sort of exploration timestamp on EQs), when available data['TS_id']: GRRM path number (exploration timestamp on paths), when available data['node_id']: Position in path, when available Datasets: WilkinsonAFIRdb.db: DFT-powered AFIR-based search data (including the single geometry with failed xTB convergence) pureNNP_20%_dataset.zip: train/val/test data from NNP model trained on the first 20% of DFT paths explored pureNNP_50%_dataset.zip: train/val/test data from NNP model trained on the first 50% of DFT paths explored pureNNP_80%_dataset.zip: train/val/test data from NNP model trained on the first 80% of DFT paths explored pureNNP_20%_localSearch.db: local NNP-powered AFIR-based search data, using NNP model trained on the first 20% of DFT paths explored pureNNP_50%_localSearch.db: local NNP-powered AFIR-based search data, using NNP model trained on the first 50% of DFT paths explored pureNNP_80%_localSearch.db: local NNP-powered AFIR-based search data, using NNP model trained on the first 80% of DFT paths explored NNPxTB_20%_localSearch: local NNP-powered AFIR-based search data, using NNP(+xTB) model trained on the first 20% of DFT paths explored NNPxTB_50%_localSearch: local NNP-powered AFIR-based search data, using NNP(+xTB) model trained on the first 50% of DFT paths explored NNPxTB_80%_localSearch: local NNP-powered AFIR-based search data, using NNP(+xTB) model trained on the first 80% of DFT paths explored xTB_localSearch: xTB-powered AFIR-based search data NNPxTB_20%_globalSearch: global/full NNP-powered AFIR-based search data, using NNP(+xTB) model trained on the first 20% of DFT paths explored (EQ and TS only) NNPxTB_50%_globalSearch: global/full NNP-powered AFIR-based search data, using NNP(+xTB) model trained on the first 50% of DFT paths explored (EQ and TS only) Note: DFT level of theory is RωB97X-D/Def2-SVP

Additional data related to the full NNP(+xTB)-powered searches will be added in a future version

Related Organizations
  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 38
    download downloads 56
  • 38
    views
    56
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
38
56