The Florida Center for Coastal and Human Health Metagenomic Workflow

The initial release of the Florida Center for Coastal and Human Health Metagenomics Workflow. Databases are hardcoded for the FCH server and should be modified for other institutions. This is a wrapper program that calls software to preprocess raw reads, annotate high-quality reads with taxonomy, assemble high-quality reads, create anvi'o databases and profiles, bin contigs, and annotate contigs for biosynthetic gene clusters. Install environments using yaml files. Contact René Xavier with any concerns (rmillerxavie2017@fau.edu) or post an issue here.

If you use this software, please cite it as below.

Impact byBIP!

	selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average