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This repository holds the source code for the Pathomove simulation, a spatially explicit, individual-based, evolutionary model of the evolution of animal social movement strategies under the risk of pathogen transmission. This is a release of a corrected version of the simulation model code, in preparation for a resubmission to eLife. The main changes here are: Correction of the implementation of exploitation competition; Addition of unit tests for agent movement, foraging, and inheritance; Addition of linting workflows for the C++ code; Reorganisation of the package code to move most of the C++ code into header files that allow building other Rcpp packages on top of pathomove.
This work was developed in the Modelling Adaptive Response Mechanisms Group (Weissing Lab) (https://www.marmgroup.eu/) at the Groningen Institute for Evolutionary Life Science, at the University of Groningen.
Rcpp, animal-movement-ecology, evolutionary-ecology, epidemiology, R-package, individual-based-model
Rcpp, animal-movement-ecology, evolutionary-ecology, epidemiology, R-package, individual-based-model
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