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Software . 2023
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JWolpe/Tn5bias: v1.0.0

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 21 Mar 2023Publisher:Zenodo
Authors: JWolpe; Guertinlab; Mjg54;
Code repository: https://github.com/JWolpe/Tn5bias/tree/v1.0.0

doi: 10.5281/zenodo.7757436 , 10.5281/zenodo.7757435

JWolpe/Tn5bias: v1.0.0

Abstract

Initial public release v1.0.0 A pre-release of the manuscript figures, manuscript vignette, seqOutATACBias software, and seqOutATACBias workflow vignette. These subfolders are meant to accompany the paper "Correction of transposase sequence bias in ATAC-seq data with rule ensemble modeling" and allow the user to both reproduce the paper's findings and apply the rule ensemble scaling, detailed in the paper, to their own data. A more thorough explanation of each part of this package may be found on the main GitHub page.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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