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dsBinVal: Conducting distributed ROC analysis using DataSHIELD

Authors: Daniel Schalk; Verena Sophia Hoffmann; Bernd Bischl; Ulrich Mansmann;

dsBinVal: Conducting distributed ROC analysis using DataSHIELD

Abstract

Methods to conduct distributed ROC and calibration analyses. The basis is the DataSHIELD <https://www.datashield.org> infrastructure for distributed computing. This package provides the calculation of the ROC-GLM <https://www.jstor.org/stable/2676973?seq=1> as well as AUC confidence intervals <https://www.jstor.org/stable/2531595?seq=1>. To assess the calibration, methods to calculate the Brier score and calibration curves are part of the package. The last part of the package are methods to push models and predict models at the DataSHIELD server which is necessary for the analysis. DataSHIELD uses the option `datashield.privacyLevel` to indicate the minimum amount of numbers required to be allowed to share an aggregated value of these numbers. Instead of setting the option, we directly retrieve the privacy level from the DESCRIPTION <https://github.com/difuture-lmu/dsBinVal/blob/master/DESCRIPTION> file each time a function calls for it. This option is set to 5 by default. Methodological details can be viewed in Schalk et al. (2022) <arXiv:2203.10828>.

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Keywords

distributed computing, diagnostic tests, model validation, DataSHIELD, prognostic model, distributed analysis, privacy-preserving, calibration, ROC-GLM, discrimination

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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