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Hierarchical Optimal Sampling (HOS): a tool for managing and manipulating wide-field imaging datasets

Authors: De Luca, Chiara; Bernava, Irene; De Bonis, Giulia; Simula, Francesco; Resta, Francesco; Montagni, Elena; Mascaro, Anna Letizia Allegra; +2 Authors

Hierarchical Optimal Sampling (HOS): a tool for managing and manipulating wide-field imaging datasets

Abstract

Powerful recording techniques and increasing anatomical knowledge provided by atlases allow studying the brain at a new level with unprecedented spatial resolution as that achieved with wide-field calcium imaging data. One of the the main issues related to the increase of the spatial resolution is to find the optimal condition which allows to obtain an appropriate signal-to-noise ratio for each channel, relative to the phenomenon of interest. Hierarchical Optimal Sampling (HOS) provides a data-driven inhomogeneous gridding of the field of view with the optimal spatial resolution that preserves and emphasizes the majority of the information from the high number of native signal sources.

Keywords

Wide-field Imaging, Spatial Resolution, Signal-to-Noise Ratio, Data Capability, Analysis Pipeline, Algorithm, Software Tool, Wide-field Imaging, Spatial Resolution, Signal-to-Noise Ratio, Data Capability, Analysis Pipeline, Algorithm, Software Tool

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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