Downloads provided by UsageCounts
This dataset is intended to be used for automated testing of OME-Zarr processing. Example dataset of human induced pluripotent stem cells, imaged at 40x magnification with a Yokogawa CV7000. This is a tiny subset of a larger experiment intended as a test dataset for Fractal: https://github.com/fractal-analytics-platform/fractal It is a subset of this dataset: https://zenodo.org/record/7057076 1 Channel is included: - C01: DAPI, nuclear stain This dataset contains 2 Z levels for 2 field of views for this 1 channel, as well as (manually adjusted) metadata files from the Yokogawa CV7000. The data was acquired in the Pelkmans lab in August 2020. The images have been processed using Fractal, the workflow is attached as a json file. It was run using this script to generate the workflow. It ran with fractal-server==1.3.1, fractal-client==1.3.0 and fractal-tasks-core==0.10.0. Two versions are added here: A 3D version with both Z planes. And a 2D version (MIP of the Z-planes) which also contains label images from cellpose segmentation.
OME-NGFF, fractal, image analysis, OME-Zarr, high content imaging, immunofluorescence
OME-NGFF, fractal, image analysis, OME-Zarr, high content imaging, immunofluorescence
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |
| views | 37 | |
| downloads | 5K |

Views provided by UsageCounts
Downloads provided by UsageCounts