Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Other ORP type . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Other ORP type . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Other ORP type . 2022
License: CC BY
Data sources: ZENODO
versions View all 2 versions
addClaim

A new species of Agaricus sect. Agaricus (Agaricaceae) from India

Authors: Ck, Pradeep;

A new species of Agaricus sect. Agaricus (Agaricaceae) from India

Abstract

Morphological study Agaricus specimens were gathered during the monsoon seasons of 2016 and 2021 from the grasslands of the JNTBGRI campus. Photographs of fresh specimens were taken in the field along with information about habit, habitat, odor and color changes. Macroscopic characters were drawn from fresh specimens with color codes following Kornerup and Wanscher (1978). Schäffer's and KOH reactions were tested on fresh basidiomata surfaces. Basidiomata were dried overnight in a hot air oven at 50°C and sealed in zip lock covers. The holotype was deposited in the Central National Herbarium (CAL) in Calcutta, India, with CAL accession numbers. All additional specimens (paratypes) investigated are preserved at the Jawaharlal Nehru Tropical Botanic Garden and Research Institute's Mycological Herbarium Thiruvananthapuram (TBGT). For microscopic examination, sections of the dried basidiomata were made and mounted in 3% aqueous KOH and stained with 1% Congo red. Features of basidiospores, basidia, cheilocystidia, pileipellis and annulus were measured and illustrated based on at least 30 measurements using an Olympus CX43 microscope. Basidiospore measurements include the range of all spores, together with the range of spore quotient ((Q), length/width ratio) and its mean value (Qm). The hilar appendix was excluded in the basidiospore measurements.DNA extraction, PCR and sequencingGenomic DNA was extracted from fresh specimens of the new Agaricus species following Izumitsu et al. (2012). The ITS1-5.8S-ITS4 region of rDNA were amplified with the primer pair ITS1 and ITS4 (White et al. 1990). The protocols for PCR amplification and sequencing followed Kumar et al. (2018a). The PCR products were sequenced at the commercial facility AgriGenome, Kochi. All the sequences obtained in this work have been deposited in GenBank (ON555779, ON555770).Sequence alignment and phylogenetic analysisThe dataset comprised two sequences from the specimens collected in the present study, and 58 reference sequences representing 40 species that were downloaded from GenBank, including A. bisporus (J.E.Lange) Imbatch which was used as the outgroup following Liu et al. (2020). The GenBank accession numbers of retrieved and newly generated sequences are given Table 1. Sequences were aligned by the MAFFT web tool (<www.ebi.ac.uk/Tools/msa/mafft/>) with default settings. The aligned data matrix of nrITS sequences from 60 taxa, including A. bisporus as outgroup, was then manually adjusted in BioEdit v7.2.6.1 (Hall 1999). Maximum likelihood (ML) analysis was performed in RAxMLGUI 2.0 (Edler et al. 2021) under a GTR+GAMMA model with 1000 rapid bootstrap replicates. The best substitution model was selected as per the BIC score by running model test in the same software. The phylogram inferred from the ML analysis was visualised with MEGA X (Kumar et al. 2018b).

Agaricus albovariabilis is presented as a new species from peninsular India on the basis of morphological features and ITS sequence analysis. It is charcterized by small to medium sized white basidiomata, becoming brownish at maturity, unchanging context, mild anise odor, negative Schäffer's and KOH reactions, and clavate to vesiculose clavate cheilocystidia. It is presented with detailed descriptions, photographs, phylogenetic reconstruction and a comparison with phenetically similar species.

Funding provided by: CSIRCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100001412Award Number: 09/592(0031)/2019-EMR-I

Keywords

Kerala, nrITS, grassland, phylogeny, diversity

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 1
    download downloads 4
  • 1
    views
    4
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
1
4