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BioJulia/BioSequences.jl: v3.0.2

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 07 Jan 2022Publisher:Zenodo
Authors: Jakob Nybo Nissen; Sabrina Jaye Ward; Kenta Sato; cjprybol; Ciarán O'Mara; Kevin Bonham; Tony Kelman; +9 Authors
Code repository: https://github.com/BioJulia/BioSequences.jl/tree/v3.0.2

doi: 10.5281/zenodo.6805821 , 10.5281/zenodo.5826364 , 10.5281/zenodo.7107958 , 10.5281/zenodo.6937511 , 10.5281/zenodo.6588791

BioJulia/BioSequences.jl: v3.0.2

Abstract

BioSequences v3.0.2 Diff since v3.0.0 Closed issues: Implement reverse translation (AminoAcid -> Codon) (#168) findnext, findprev broken ... possible to add findall? (#215) LongDNA, LongRNA "not defined" (#216) Implement findall (#217) What happened to DNAMer? (#222) 🐛 in iscanonical / canonical (#225) join(LongRNA{2}, (RNA_A,)) should work (#230) Merged pull requests: Small internal refactors (#210) (@jakobnissen) Correct Julia compatibility entry (#214) (@CiaranOMara) Add findall method (#218) (@CiaranOMara) 🐛-fix iscanonical (#227) (@SabrinaJaye) Fix small errors (#228) (@jakobnissen) Sequence hashing: Bugfix and slight simplification (#229) (@jakobnissen) Allow join to work with BioSymbol (#234) (@jakobnissen) Fix ambiguity errors (#235) (@jakobnissen) Use codeunits over unsafe_wrap (#239) (@jakobnissen) Cosmetic changes in constructors (#240) (@jakobnissen) Use naive hash fallback for BioSequence (#244) (@jakobnissen) Reset Julia compat to v1.5 (#245) (@jakobnissen)

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