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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2022
License: CC BY
Data sources: ZENODO
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Datasets for "Single-molecule and super-resolved imaging deciphers membrane behaviour of onco-immunogenic CCR5"

Authors: Patrick Hunter; Alex L Payne-Dwyer; Nathalie Signoret; Michael Shaw; Mark C Leake;

Datasets for "Single-molecule and super-resolved imaging deciphers membrane behaviour of onco-immunogenic CCR5"

Abstract

Flow cytometry Modality / instrument: Flow cytometer (CytoFLEX LX, Beckman Coulter) File format: FCS + XIT (CytExpert, Beckman Coulter). Samples and acquisitions: Fluorescent fusions in live Chinese Hamster ovary (CHO) cells. File Cell line Runs Cells counted CONTROL.fcs CHO wild-type 1 7000 GFP-CCR5.fcs CHO-GFP-CCR5 1 7000 Exp_20220916_1_GFP.xit N/A - metadata Approx. size 6 MB PaTCH microscopy images Imaging modality / instrument: Brightfield + PaTCH fluorescence microscopy Image format: OME TIFF (16 bit) + MicroManager metadata files Microscope settings: 488 nm triggered excitation; split red/green detection, cropped to green (GFP) channel only; 10 ms/frame laser exposure; 13.5 ms/frame-to-frame; 53 nm/px. Photometrics Prime95b CMOS. Samples and acquisitions: Fluorescent fusions of GFP-CCR5 receptor in live CHO cells imaged with and without 100 nM CCL5 ligand. Each subfolder corresponds to a field of view and contains one brightfield and one PaTCH acquisition of the same cell. Folder Condition Fields of view AC6 CONTROL sc CCL5- 11 AC6 CCL5 sc CCL5+ (100 nM) 10 Approx. size before compression: 14 GB Structured illumination microscopy - volumetric stacks Imaging modality / instrument: SIM fluorescence microscopy (custom setup at NPL based on Olympus IX71) Image format: OME TIFF (16 bit) with intrinsic metadata (voxel size) Microscope settings: 638 nm excitation; 60x/1.3 NA; Flash 4.0, Hamamatsu Photonics. For additional details see the reference below (Hunter et al, bioRxiv). Samples and acquisitions: Dylight 650-MC-5 labeled CCR5 receptor in fixed CHO-CCR5 cells, imaged with and without 100 nM CCL5 ligand. Each acquisition is of a unique field of view and contains one SIM reconstruction as an XYZ volumetric stack. ‘Basal membrane’ acquisitions consist of 5 slices at 200 nm z-intervals across the range of the basal membrane. ‘Whole cell' acquisitions are made up of 7 slices with 500 nm z-interval ranging from just below the basal membrane to just above the apical membrane. Folder Subfolder/condition Fields of view Basal membrane CCL5- 5 Basal membrane CCL5+ (100 nM) 6 Whole cells CCL5- 5 Whole cells CCL5+ (100 nM) 8 Approx. size before compression: 300 MB

{"references": ["Single-molecule and super-resolved imaging deciphers membrane behaviour of onco-immunogenic CCR5. Patrick Hunter, Alex L. Payne-Dwyer, Michael Shaw, Nathalie Signoret and Mark C. Leake. bioRxiv\u00a02022.05.19.492692v1;\u00a0doi:\u00a0https://doi.org/10.1101/2022.05.19.492692"]}

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Keywords

immunology, GPCR, single-molecule imaging, flow cytometry, structured illumination microscopy, Slimfield, plasma membrane, PaTCH

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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