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Enhancers display sequence flexibility constrained by transcription factor motif syntax

Authors: Reiter, Franziska; de Almeida, Bernardo P; Stark, Alexander;

Enhancers display sequence flexibility constrained by transcription factor motif syntax

Abstract

This repository holds the data necessary to reproduce all results and figures from the manuscript "Enhancers display sequence flexibility constrained by transcription factor motif syntax" for each of the main sections: Random_variant_STARRseq Random 8nt variants tested at seven enhancer positions in Drosophila S2 cells Drosophila_motif_pasting_STARRseq Systematic pasting of Drosophila TF motifs in hundreds of enhancer positions Human_motif_pasting_STARRseq Systematic pasting of human TF motifs in hundreds of enhancer positions The code can be found at https://github.com/bernardo-de-almeida/Variant_STARRseq.

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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