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maize-genetics/rTASSEL: v0.9.29

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 18 Aug 2022Publisher:Zenodo
Authors: Brandon Monier; Edward Buckler; Arcadio Valdes Franco; lynnjo; ter56; SarahEJensen; Travis Wrightsman;

doi: 10.5281/zenodo.7116966 , 10.5281/zenodo.6977429 , 10.5281/zenodo.10083800 , 10.5281/zenodo.7008097 , 10.5281/zenodo.8370188

maize-genetics/rTASSEL: v0.9.29

Abstract

Added genotype table summary methods: positionList() taxaSummary() siteSummary() TasselGenotypePhenotype objects containing genotype table data can now be coerced into R matrix objects using the function as.matrix() This will return a taxa x site matrix where taxa is the number of rows and sites is the number of columns. Added generalized join methods: intersectJoin() unionJoin() Joins phenotype data data based on taxa ID - similar to the TASSEL API Added read method for importing GIGWA data through QBMS: readGenotypeTableFromGigwa()

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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