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Use Case: International Mouse Phenotype Consortium

Name: Use Case: International Mouse Phenotype Consortium
Creator: Tudor Groza
Keywords: FAIR data, IMPC, phenomics

descriptionPublicationkeyboard_double_arrow_right Presentation , Other literature type 15 Jul 2022 English Publisher:ZenodoFunded by:NIH | Mouse Phenotyping Informa...

Authors: Tudor Groza;

doi: 10.5281/zenodo.6840541 , 10.5281/zenodo.6840542

Use Case: International Mouse Phenotype Consortium

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Abstract

Presentation as part of the Workshop "Open Science and FAIR Data for Neuroscience, Department of Neuroscience, University of Turin, Italy, June 6-7-9-15, 2022, Focus on Neuroscience and Neuroimaging, Computational Phenotyping ("phenomics"), Rare Diseases". A particular use case: the architecture and tooling used by the Core Data Archive component of the International Mouse Phenotyping Consortium (IMPC; https://www.mousephenotype.org/) - EBI, with concrete tooling used to manage FAIR data, including standardization process, data acquisition, ETL, handling imaging data and data releases.

Related Organizations

European Molecular Biology Laboratory
Germany
European Bioinformatics Institute
United Kingdom

Keywords

FAIR data, IMPC, phenomics

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NIH| Mouse Phenotyping Informatics Infrastructure - MP12