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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
Research.fi
Dataset . 2022
License: CC BY
Data sources: Research.fi
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Fast4DRegistration

Authors: Pylvänäinen, Joanna W; Laine, Romain F; Ghimire, Sujan; Follain, Gautier; Jacquemet, Guillaume;
Abstract

Fast4DReg: A New Pipeline for 3D Video Drift Correction Pylvänäinen J.W et al, 2022 Fast4DReg is a Fiji macro for drift correction in 3D video and is able to correct drift in all x-, y- and/or z-directions. Fast4DReg creates intensity projections along both axes and estimates their drift using the NanoJ-Core (Laine et al., 2019) cross-correlation-based drift correction, and then translates the 3D video frame by frame (Figure 1). Additionally, Fast4DReg can be used for aligning multichannel 3D images which is particularly useful for instruments that suffer from a misalignment of channels. Datasets are available in Zenodo: 1 Software archive 1.1 Fast4DReg scripts (4) 1.2 Helper scripts (2) 1.3 Documentation from GitHub 2 Dataset 1: Synthetic drift -datasets 2.1 Synthetic drift files (3) 2.2 Expected results (6) 3 Dataset 2: the HUVEC monolayer -dataset 3.1 Biological dataset HUVEC channel 1 original 3.2 Biological dataset HUVEC channel 1 F4DReg 3.3 Biological dataset HUVEC channel 1 C3DD 4 Channel alignment 4.1 Dataset 3: Registration slide -dataset (2) 4.2 Dataset 4: Filopodia-dataset (2) 5 Videos 5.1 Video 1 5.2 Video 2 5.3 Video 3

Country
Finland
Related Organizations
Keywords

channel registration, drift correction, 3D, channel registration, drift correction, 3D, live cell imaging

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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