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SPOKE: An Open Knowledge Network for Precision Medicine

Authors: Israni, Sharat; Baranzini, Sergio;

SPOKE: An Open Knowledge Network for Precision Medicine

Abstract

We present SPOKE, an Open Knowledge Network (OKN) for Precision Medicine. The network spans from genomic, through the epigenomic, protein, tissue, organ and anatomy layers of the human body and its diseases; and beyond the body to exogeneous factors such as drugs, and environmental factors such as water contaminants. Derived from 45 very large scientifically accepted datasets, the network consists of about 45 million nodes and 75 million relationships, and continues to grow. Its application in precision medicine, and predictions of conditions such as Parkinson's disease per patient, are illustrated.

Keywords

Knowledge Graph, Knowledge Network, Drugs, Proteins, Metabolomics, Diseases, Genomics

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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