# Input files: i) PvSpz_scRNAseq_matrices.zip - contains the STARsolo output files aligned to the P. vivaxP01 genome with and without UTR information. ii) Sa_BloodStage_scRNAseq_matrices.zip - contains the reprocessed P. vivax scRNA-seq blood-stage data published by Sà et al. (2020) (Bioproject ID: PRJNA603327). The STARsolo output files were aligned to the P. vivaxP01 genome with and without UTR information. iii) Real_PfSpz_scRNAseq_matrices.zip - contains the output files from Real et al. 2021. This data can be accessed at: https://github.com/vhowick/pf_moz_stage_atlas # Scripts: i) PvSpz_scRNAseq_scripts.zip - contains the scripts (.Rmd files) used to process the 10x scRNA-seq data. # Output files: i) outputs.zip - contains the .RDS files generates from the various single-cell RNA-seq processing steps. #Raw sequencing files (fastq): i) European Nucleotide Archive (https://www.ebi.ac.uk/ena/) - Project: PRJEB42435

Scripts, preprocessed count matrices, single-cell data objects, and generated data (tables and .rds files) from the scRNA-seq analyses performed in “Single-cell RNA sequencing of Plasmodium vivax sporozoites reveals stage- and species-specific transcriptomic signatures".