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DSMZCellDive - DSMZ Tools for Diving into Cell Line Data

Authors: Koblitz, Julia; Pommerenke, Claudia;

DSMZCellDive - DSMZ Tools for Diving into Cell Line Data

Abstract

The public cell line collection of the Human and Animal Cell Line department at DSMZ today holds more than 860 cell lines available for the research community. Of these about 600 are of human origin and about 260 of animal origin. Human cell lines are mostly derived from malignant tumour material donated by patients. Cell lines serve as in vitro models for the respective diseases and are of importance for understanding the molecular changes underlying human disease. In the past 10 years high-throughput sequencing techniques became available and enabled in depth analysis of the cellular genome and transcriptomes. In 2016 we started to perform RNA-seq of all human cell lines included in the open cell line collection. DSMZCellDive offers analysis tools like barplots and heatmaps to plot gene expression leves in cell lines of choice, which are presented according to cell type/tumour entity. This enables researchers to decide on the best appropriate model for their research questions.

Keywords

cancer research, STR profiling, cell lines, RNA-seq

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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Related to Research communities
Cancer Research