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ZENODO
Dataset . 2021
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
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Data used in ECLIPSER methods paper and GTEx snRNA-seq cross-tissue reference map analysis

Authors: Rouhana, John; Wang, Jiali; Eraslan, Gokcen; Anand, Shankara; Hamel, Andrew; Cole, Brian; Regev, Aviv; +3 Authors

Data used in ECLIPSER methods paper and GTEx snRNA-seq cross-tissue reference map analysis

Abstract

The tables were used in the papers: Rouhana*, Wang* et al., ECLIPSER: identifying causal cell types and genes for complex traits through single cell enrichment of e/sQTL-mapped genes in GWAS loci, bioRxiv 2021, doi: https://doi.org/10.1101/2021.11.24.469720; and Eraslan et al., Single-nucleus cross-tissue molecular reference maps to decipher disease gene function, bioRxiv 2021, doi: https://doi.org/10.1101/2021.07.19.452954. 'GTEx_v8_HG38_all_variants.tsv.gz' is an input file for running GWASvar2gene on GTEx v8 eQTLs and sQTLs, and all other files are input files for ECLIPSER.

This work was supported by the Chan Zuckerberg Initiative (CZI) Seed Network for the Human Cell Atlas awards CZF2019-002459 (A.V.S, J.M.R) and 2019-02455 (K.G.A.), National Institutes of Health, National Eye Institute R01 EY031424-01 (A.V.S, J.M.R, A.R.H., B.C.), and NIH, NHGRI 5U41HG009494 (S.A., F.A., K.G.A.), and funds from the Manton Foundation, Klarman Family Foundation and HHMI (A.R.).

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Keywords

GWAS, single cell RNA-seq expression, gene set enrichment

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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