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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2022
License: CC BY
Data sources: ZENODO
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DCSsim (simulated) and DCSsub (sub-sampled) ChIP-seq data from different chromosomes.

Authors: Eder Thomas; Grebien Florian;

DCSsim (simulated) and DCSsub (sub-sampled) ChIP-seq data from different chromosomes.

Abstract

These data are the results from three independent runs of DCSsim and DCSsub for TF, sharp and broad mark signals in 50:50 regulation scenarios for mm10 chr1, chr8, chr11, chr19 and chrX. Simulated data from DCSsim: simulated_ChIP-seq_data.zip set1: TF 50:50 chr11 set4: TF 50:50 chr8 set7: TF 50:50 chrX set10: TF 50:50 chr1 set22: TF 50:50 chr19 set2: Sharp mark 50:50 chr11 set5: Sharp mark 50:50 chr8 set8: Sharp mark 50:50 chrX set11: Sharp mark 50:50 chr1 set23: Sharp mark 50:50 chr19 set3: Broad mark 50:50 chr11 set6: Broad mark 50:50 chr8 set9: Broad mark 50:50 chrX set12: Broad mark 50:50 chr1 set24: Broad mark 50:50 chr19 Sub-sampled data from DCSsub: sub-sampled_ChIP-seq_data.zip Set1: C/EBPa-ChIP-seq 50:50 chr11 Set2: C/EBPa-ChIP-seq 50:50 chr8 Set3: C/EBPa-ChIP-seq 50:50 chrX Set4: C/EBPa-ChIP-seq 50:50 chr1 Set5: H3K27ac-ChIP-seq 50:50 chr11 Set6: H3K27ac-ChIP-seq 50:50 chr8 Set7: H3K27ac-ChIP-seq 50:50 chrX Set8: H3K27ac-ChIP-seq 50:50 chr1 Set9: H3K36me3-ChIP-seq 50:50 chr11 Set10: H3K36me3-ChIP-seq 50:50 chr8 Set11: H3K36me3-ChIP-seq 50:50 chrX Set12: H3K36me3-ChIP-seq 50:50 chr1 C/EBPa-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set8) H3K27ac-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set9) H3K36me3-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set10)

{"references": ["Eder, T., Grebien, F. Comprehensive assessment of differential ChIP-seq tools guides optimal algorithm selection. Genome Biol 23, 119 (2022). https://doi.org/10.1186/s13059-022-02686-y"]}

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Keywords

Simulated ChIP-seq data, DCSsim, Sub-sampled ChIP-seq data, Simulated NGS data, DCSsub

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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