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Data sources: ZENODO
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ZENODO
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License: CC BY
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ZENODO
Dataset . 2021
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HT1080WT cells embedded in 3D collagen type I matrices - manual annotations for cell instance segmentation and tracking

Authors: Estibaliz Gómez-de-Mariscal; Hasini Jayatilaka; Denis Wirtz; Arrate Muñoz-Barrutia;

HT1080WT cells embedded in 3D collagen type I matrices - manual annotations for cell instance segmentation and tracking

Abstract

Human fibrosarcoma HT1080WT (ATCC) cells at low cell densities embedded in 3D collagen type I matrices [1]. The time-lapse videos were recorded every 2 minutes for 16.7 hours and covered a field of view of 1002 pixels �� 1004 pixels with a pixel size of 0.802 ��m/pixel The videos were pre-processed to correct frame-to-frame drift artifacts, resulting in a final size of 983 pixels �� 985 pixels pixels. Hasini Jayatilaka, Anjil Giri, Michelle Karl, Ivie Aifuwa, Nicholaus J Trenton, Jude M Phillip, Shyam Khatau, and Denis Wirtz. EB1 and cytoplasmic dynein mediate protrusion dynamics for efficient 3-dimensional cell migration. FASEB J., 32(3):1207���1221, 2018. ISSN 0892-6638. doi: 10.1096/fj.201700444RR. Further information about how to use this data is given in https://github.com/esgomezm/microscopy-dl-suite-tf This dataset is provided together with the following preprint and if you use it, we would like to kindly ask you to cite it properly: Estibaliz G��mez-de-Mariscal, Hasini Jayatilaka, ��zg��n ��i��ek, Thomas Brox, Denis Wirtz, Arrate Mu��oz-Barrutia, *Search for temporal cell segmentation robustness in phase-contrast microscopy videos*, arXiv 2021 (arXiv:2112.08817)

{"references": ["Estibaliz G\u00f3mez-de-Mariscal, Hasini Jayatilaka, \u00d6zg\u00fcn \u00c7i\u00e7ek, Thomas Brox, Denis Wirtz, Arrate Mu\u00f1oz-Barrutia, Search for temporal cell segmentation robustness in phase-contrast microscopy videos, arXiv 2021 (arXiv:2112.08817)", "Hasini Jayatilaka, Anjil Giri, Michelle Karl, Ivie Aifuwa, Nicholaus J Trenton, Jude M Phillip, Shyam Khatau, and Denis Wirtz. EB1 and cytoplasmic dynein mediate protrusion dynamics for efficient 3-dimensional cell migration. FASEB J., 2018."]}

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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