Supplementary material for "A Message Passing framework with Multi-data Integration for miRNA-Disease Association Prediction". Contains the code for a Python application as well as a Windows executable to query the data and results. Windows Executable To run the Windows EXE, open the MPM.exe in the folder MPM Windows EXE. The application will open. Python Application Requirements: - Python 3 - Pandas 1.3.5 To run the Python code, locate to the folder MPM Python Application and run `python3 window.py`. The application GUI will open in a new window. Use the Application To use the application, first select the category of the entity you want to inspect, i.e. miRNA, disease or pathway. Then enter a valid entity and confirm your choice by hitting enter, alternatively you can select an entity from the drop down menu. After selecting a valid entity, you can query information about that entity by clicking the corresponding button on the left. For more detailed instructions on how to use the application, please see Appendix C. An easy to use Windows application in the paper.