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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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Claim

Activation level of 64 gene signatures in glioblastoma

Research datakeyboard_double_arrow_right Dataset 18 Oct 2021Publisher:Zenodo
Authors: Leon, Alberto; Lam, Brian; Diamandis, Phedias;

doi: 10.5281/zenodo.5576254 , 10.5281/zenodo.5576255

Activation level of 64 gene signatures in glioblastoma

Abstract

This repository includes the XGBoost models and the R scripts to infer the activation status of 64 gene signatures in GBM, as published in this manuscript: Topographic mapping of the glioblastoma proteome reveals a triple axis model of intra-tumoral heterogeneity Lam KHB, Leon AJ, Hui W, Lee SCE, Batruch I, Faust K, Koritzinsky M, Richer M, Djuric U, Diamandis P (under review) The models take as input proteomics (LFQ) of rna (TPM) expression data. Execute the following command to analyze the sample data: Rscript predictXGB.R --data sample/sample_prot.rds \ --models data/list_xgb-gbm_64_signatures-prot-v01.RData \ --out_csv predictXGB_sample_rna.csv

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Keywords

Glioblastoma, proteogenomic

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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