Example input for MAPP workflow

Small test dataset for MAPP workflow: 5mln reads sampled from two paired-end RNA-seq samples of the GEO record: GSE69656 100 arbitrarily chosen Position Weight Matrices for RNA binding proteins and their sequence logos configuration template for the workflow (YAML) experiment design table (TSV) Genomic annotation for human: chr21 (GTF) Genomic sequence for human: chr21 (FASTA) PolyAsite Atlas 2.0 annotation: chr21 (BED)

{"references": ["https://pubmed.ncbi.nlm.nih.gov/26293963/"]}

Related Organizations

University of Basel
Switzerland
University of Lausanne
Switzerland
SIB Swiss Institute of Bioinformatics
Switzerland

Keywords

FOS: Computer and information sciences, Data, Bioinformatics, RNA-Seq

Impact byBIP!

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	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average